With a fenderwell kit that goes through the stock opening will not give you enough room or less you mount it on the ledge below.  Although I can recomend an Anderson Ford powerpipe that goes through the round hole next to the stock location.  More expensive but guarantee in the long run you wont be dissappointed.   
http://www.stangtuning.com/forums/showthread.php?t=886 
		
	
		
		
		
		
		
		
			
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				93 GT 306 DSS, O-Ringed, AFR 185's, Pro Products Intakes, 55lb low imp inj, 80mm Pro-M meter, 2004 PMS, AFM Power Pipe, Kirban Reg, Vortech S-Trim 14lbs. No times yet. Trying to tune.
			 
		
		
		
		
		
		
	
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